J3_3R8N_021
3D structure
- PDB id
- 3R8N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of the bacterial ribosome in classical and hybrid states of tRNA binding
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UUUAAUUC*GAAGAACCUUAC*GGCUA
- Length
- 25 nucleotides
- Bulged bases
- 3R8N|1|A|A|975, 3R8N|1|A|G|976
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_3R8N_021 not in the Motif Atlas
- Geometric match to J3_8B0X_007
- Geometric discrepancy: 0.0806
- The information below is about J3_8B0X_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88451.1
- Basepair signature
- cWW-tWW-F-F-F-F-F-tSS-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
3R8N|1|A|U|955
3R8N|1|A|U|956
3R8N|1|A|U|957
3R8N|1|A|A|958
3R8N|1|A|A|959
3R8N|1|A|U|960
3R8N|1|A|U|961
3R8N|1|A|C|962
*
3R8N|1|A|G|973
3R8N|1|A|A|974
3R8N|1|A|A|975
3R8N|1|A|G|976
3R8N|1|A|A|977
3R8N|1|A|A|978
3R8N|1|A|C|979
3R8N|1|A|C|980
3R8N|1|A|U|981
3R8N|1|A|U|982
3R8N|1|A|A|983
3R8N|1|A|C|984
*
3R8N|1|A|G|1221
3R8N|1|A|G|1222
3R8N|1|A|C|1223
3R8N|1|A|U|1224
3R8N|1|A|A|1225
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S13
- Chain N
- 30S ribosomal protein S14
- Chain S
- 30S ribosomal protein S19
Coloring options: