J3_3T1H_006

3D structure

PDB id

3T1H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.11 Å

Loop

Sequence

GGAACC*GGGUGCCC*GGAGCC

Length

20 nucleotides

Bulged bases

3T1H|1|A|U|1003

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

3T1H|1|A|G|980
3T1H|1|A|G|981
3T1H|1|A|A|982
3T1H|1|A|A|983
3T1H|1|A|C|984
3T1H|1|A|C|985
*
3T1H|1|A|G|1000
3T1H|1|A|G|1001
3T1H|1|A|G|1002
3T1H|1|A|U|1003
3T1H|1|A|G|1004
3T1H|1|A|C|1005
3T1H|1|A|C|1006
3T1H|1|A|C|1007
*
3T1H|1|A|G|1015
3T1H|1|A|G|1016
3T1H|1|A|A|1017
3T1H|1|A|G|1018
3T1H|1|A|C|1019
3T1H|1|A|C|1020

Current chains

Chain A

16s rRNA

Nearby chains