3D structure

PDB id
4BTS (explore in PDB, NAKB, or RNA 3D Hub)
Description
THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
Experimental method
X-RAY DIFFRACTION
Resolution
3.7 Å

Loop

Sequence
UAGAUAUUAGACCAAUCG*UGAUUGAG*CAAA
Length
30 nucleotides
Bulged bases
4BTS|1|BA|U|211, 4BTS|1|BA|U|213, 4BTS|1|BA|U|214, 4BTS|1|BA|U|236
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4BTS|1|BA|U|207
4BTS|1|BA|A|208
4BTS|1|BA|G|209
4BTS|1|BA|A|210
4BTS|1|BA|U|211
4BTS|1|BA|A|212
4BTS|1|BA|U|213
4BTS|1|BA|U|214
4BTS|1|BA|A|215
4BTS|1|BA|G|216
4BTS|1|BA|A|217
4BTS|1|BA|C|218
4BTS|1|BA|C|219
4BTS|1|BA|A|220
4BTS|1|BA|A|221
4BTS|1|BA|U|222
4BTS|1|BA|C|223
4BTS|1|BA|G|224
*
4BTS|1|BA|U|233
4BTS|1|BA|G|234
4BTS|1|BA|A|235
4BTS|1|BA|U|236
4BTS|1|BA|U|237
4BTS|1|BA|G|238
4BTS|1|BA|A|239
4BTS|1|BA|G|240
*
4BTS|1|BA|C|247
4BTS|1|BA|A|248
4BTS|1|BA|A|249
4BTS|1|BA|A|250

Current chains

Chain BA
18S ribosomal RNA

Nearby chains

Chain B2
40S RIBOSOMAL PROTEIN S8
Chain BQ
40S RIBOSOMAL PROTEIN RPS11E
Chain BW
40S RIBOSOMAL PROTEIN RPS4E
Chain BY
40S RIBOSOMAL PROTEIN S6

Coloring options:

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