J3_4BTS_064
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- AAC*GGACUA*UGGAAGUUU
- Length
- 18 nucleotides
- Bulged bases
- 4BTS|1|CA|U|1360, 4BTS|1|CA|U|1384, 4BTS|1|CA|U|1385
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4BTS_064 not in the Motif Atlas
- Homologous match to J3_8P9A_083
- Geometric discrepancy: 0.1388
- The information below is about J3_8P9A_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_88233.1
- Basepair signature
- cWW-F-tWH-cWW-cWW-F-tSW-tWS-cWW-F
- Number of instances in this motif group
- 2
Unit IDs
4BTS|1|CA|A|1308
4BTS|1|CA|A|1309
4BTS|1|CA|C|1310
*
4BTS|1|CA|G|1356
4BTS|1|CA|G|1357
4BTS|1|CA|A|1358
4BTS|1|CA|C|1359
4BTS|1|CA|U|1360
4BTS|1|CA|A|1361
*
4BTS|1|CA|U|1378
4BTS|1|CA|G|1379
4BTS|1|CA|G|1380
4BTS|1|CA|A|1381
4BTS|1|CA|A|1382
4BTS|1|CA|G|1383
4BTS|1|CA|U|1384
4BTS|1|CA|U|1385
4BTS|1|CA|U|1386
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain CG
- 40S RIBOSOMAL PROTEIN RPS5E
- Chain CI
- 40S RIBOSOMAL PROTEIN RPS16E
- Chain CJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain CN
- 40S RIBOSOMAL PROTEIN RPS29E
- Chain CR
- 40S RIBOSOMAL PROTEIN RACK1
- Chain CV
- 40S RIBOSOMAL PROTEIN RPS17E
Coloring options: