J3_4DR2_006

3D structure

PDB id

4DR2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with multiple copies of paromomycin molecules bound

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

UAGGGAAC*GGUGCCC*GGGAGCCCUA

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DR2|1|A|U|1000
4DR2|1|A|A|1001
4DR2|1|A|G|1002
4DR2|1|A|G|1003
4DR2|1|A|G|1003|||A
4DR2|1|A|A|1004
4DR2|1|A|A|1005
4DR2|1|A|C|1006
*
4DR2|1|A|G|1023
4DR2|1|A|G|1024
4DR2|1|A|U|1025
4DR2|1|A|G|1026
4DR2|1|A|C|1027
4DR2|1|A|C|1028
4DR2|1|A|C|1029
*
4DR2|1|A|G|1032
4DR2|1|A|G|1033
4DR2|1|A|G|1034
4DR2|1|A|A|1035
4DR2|1|A|G|1036
4DR2|1|A|C|1037
4DR2|1|A|C|1038
4DR2|1|A|C|1039
4DR2|1|A|U|1040
4DR2|1|A|A|1041

Current chains

Chain A

16S rRNA

Nearby chains