J3_4DR5_006

3D structure

PDB id

4DR5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin bound

Experimental method

X-RAY DIFFRACTION

Resolution

3.45 Å

Loop

Sequence

GGGAAC*GGUGCCC*GGGAGCCC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DR5|1|A|G|1002
4DR5|1|A|G|1003
4DR5|1|A|G|1003|||A
4DR5|1|A|A|1004
4DR5|1|A|A|1005
4DR5|1|A|C|1006
*
4DR5|1|A|G|1023
4DR5|1|A|G|1024
4DR5|1|A|U|1025
4DR5|1|A|G|1026
4DR5|1|A|C|1027
4DR5|1|A|C|1028
4DR5|1|A|C|1029
*
4DR5|1|A|G|1032
4DR5|1|A|G|1033
4DR5|1|A|G|1034
4DR5|1|A|A|1035
4DR5|1|A|G|1036
4DR5|1|A|C|1037
4DR5|1|A|C|1038
4DR5|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains