J3_4DUY_019

3D structure

PDB id

4DUY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C

Experimental method

X-RAY DIFFRACTION

Resolution

3.39 Å

Loop

Sequence

GGGAACCC*GGGGUGCCC*GGGAGCCC

Length

25 nucleotides

Bulged bases

4DUY|1|A|A|1004, 4DUY|1|A|C|1027

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DUY|1|A|G|1002
4DUY|1|A|G|1003
4DUY|1|A|G|1003|||A
4DUY|1|A|A|1004
4DUY|1|A|A|1005
4DUY|1|A|C|1006
4DUY|1|A|C|1007
4DUY|1|A|C|1008
*
4DUY|1|A|G|1021
4DUY|1|A|G|1022
4DUY|1|A|G|1023
4DUY|1|A|G|1024
4DUY|1|A|U|1025
4DUY|1|A|G|1026
4DUY|1|A|C|1027
4DUY|1|A|C|1028
4DUY|1|A|C|1029
*
4DUY|1|A|G|1032
4DUY|1|A|G|1033
4DUY|1|A|G|1034
4DUY|1|A|A|1035
4DUY|1|A|G|1036
4DUY|1|A|C|1037
4DUY|1|A|C|1038
4DUY|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains