J3_4DV0_006

3D structure

PDB id

4DV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

GGGAAC*GGUGC*GAGCCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV0|1|A|G|1002
4DV0|1|A|G|1003
4DV0|1|A|G|1003|||A
4DV0|1|A|A|1004
4DV0|1|A|A|1005
4DV0|1|A|C|1006
*
4DV0|1|A|G|1023
4DV0|1|A|G|1024
4DV0|1|A|U|1025
4DV0|1|A|G|1026
4DV0|1|A|C|1027
*
4DV0|1|A|G|1034
4DV0|1|A|A|1035
4DV0|1|A|G|1036
4DV0|1|A|C|1037
4DV0|1|A|C|1038
4DV0|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains