J3_4DV1_015
3D structure
- PDB id
- 4DV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G, bound with streptomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.85 Å
Loop
- Sequence
- CAAG*CUAGUAAU*GUGAAUACG
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4DV1|1|A|C|936
4DV1|1|A|A|937
4DV1|1|A|A|938
4DV1|1|A|G|939
*
4DV1|1|A|C|1344
4DV1|1|A|U|1345
4DV1|1|A|A|1346
4DV1|1|A|G|1347
4DV1|1|A|U|1348
4DV1|1|A|A|1349
4DV1|1|A|A|1350
4DV1|1|A|U|1351
*
4DV1|1|A|G|1371
4DV1|1|A|U|1372
4DV1|1|A|G|1373
4DV1|1|A|A|1374
4DV1|1|A|A|1375
4DV1|1|A|U|1376
4DV1|1|A|A|1377
4DV1|1|A|C|1378
4DV1|1|A|G|1379
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- ribosomal protein S7
- Chain I
- ribosomal protein S9
- Chain U
- ribosomal protein THX
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