3D structure

PDB id
4DV2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
Experimental method
X-RAY DIFFRACTION
Resolution
3.65 Å

Loop

Sequence
CAAG*CUAGUAAU*GUGAAUACG
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4DV2|1|A|C|936
4DV2|1|A|A|937
4DV2|1|A|A|938
4DV2|1|A|G|939
*
4DV2|1|A|C|1344
4DV2|1|A|U|1345
4DV2|1|A|A|1346
4DV2|1|A|G|1347
4DV2|1|A|U|1348
4DV2|1|A|A|1349
4DV2|1|A|A|1350
4DV2|1|A|U|1351
*
4DV2|1|A|G|1371
4DV2|1|A|U|1372
4DV2|1|A|G|1373
4DV2|1|A|A|1374
4DV2|1|A|A|1375
4DV2|1|A|U|1376
4DV2|1|A|A|1377
4DV2|1|A|C|1378
4DV2|1|A|G|1379

Current chains

Chain A
16S rRNA

Nearby chains

Chain G
ribosomal protein S7
Chain I
ribosomal protein S9
Chain U
ribosomal protein THX

Coloring options:

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