J3_4DV2_016
3D structure
- PDB id
- 4DV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- AGGCCUUGACAUGC*GCACAG*CUUACGGCCU
- Length
- 30 nucleotides
- Bulged bases
- 4DV2|1|A|U|991, 4DV2|1|A|U|1212
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4DV2|1|A|A|986
4DV2|1|A|G|987
4DV2|1|A|G|988
4DV2|1|A|C|989
4DV2|1|A|C|990
4DV2|1|A|U|991
4DV2|1|A|U|992
4DV2|1|A|G|993
4DV2|1|A|A|994
4DV2|1|A|C|995
4DV2|1|A|A|996
4DV2|1|A|U|997
4DV2|1|A|G|998
4DV2|1|A|C|999
*
4DV2|1|A|G|1042
4DV2|1|A|C|1043
4DV2|1|A|A|1044
4DV2|1|A|C|1045
4DV2|1|A|A|1046
4DV2|1|A|G|1047
*
4DV2|1|A|C|1210
4DV2|1|A|U|1211
4DV2|1|A|U|1212
4DV2|1|A|A|1213
4DV2|1|A|C|1214
4DV2|1|A|G|1215
4DV2|1|A|G|1216
4DV2|1|A|C|1217
4DV2|1|A|C|1218
4DV2|1|A|U|1219
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- ribosomal protein S14
- Chain S
- ribosomal protein S19
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