J3_4DV2_017
3D structure
- PDB id
- 4DV2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CAAUG*CCCAGUUCGGAUUG*CAUGAAGCCG
- Length
- 29 nucleotides
- Bulged bases
- 4DV2|1|A|U|1240, 4DV2|1|A|U|1302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4DV2|1|A|C|1237
4DV2|1|A|A|1238
4DV2|1|A|A|1239
4DV2|1|A|U|1240
4DV2|1|A|G|1241
*
4DV2|1|A|C|1296
4DV2|1|A|C|1297
4DV2|1|A|C|1298
4DV2|1|A|A|1299
4DV2|1|A|G|1300
4DV2|1|A|U|1301
4DV2|1|A|U|1302
4DV2|1|A|C|1303
4DV2|1|A|G|1304
4DV2|1|A|G|1305
4DV2|1|A|A|1306
4DV2|1|A|U|1307
4DV2|1|A|U|1308
4DV2|1|A|G|1309
*
4DV2|1|A|C|1328
4DV2|1|A|A|1329
4DV2|1|A|U|1330
4DV2|1|A|G|1331
4DV2|1|A|A|1332
4DV2|1|A|A|1333
4DV2|1|A|G|1334
4DV2|1|A|C|1335
4DV2|1|A|C|1336
4DV2|1|A|G|1337
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain G
- ribosomal protein S7
- Chain M
- ribosomal protein S13
- Chain S
- ribosomal protein S19
- Chain U
- ribosomal protein THX
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