J3_4DV3_004

3D structure

PDB id

4DV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

CCUUGACAUGC*GCACAG*CUUACGG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV3|1|A|C|989
4DV3|1|A|C|990
4DV3|1|A|U|991
4DV3|1|A|U|992
4DV3|1|A|G|993
4DV3|1|A|A|994
4DV3|1|A|C|995
4DV3|1|A|A|996
4DV3|1|A|U|997
4DV3|1|A|G|998
4DV3|1|A|C|999
*
4DV3|1|A|G|1042
4DV3|1|A|C|1043
4DV3|1|A|A|1044
4DV3|1|A|C|1045
4DV3|1|A|A|1046
4DV3|1|A|G|1047
*
4DV3|1|A|C|1210
4DV3|1|A|U|1211
4DV3|1|A|U|1212
4DV3|1|A|A|1213
4DV3|1|A|C|1214
4DV3|1|A|G|1215
4DV3|1|A|G|1216

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14