J3_4DV3_016

3D structure

PDB id

4DV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, C912A, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.55 Å

Loop

Sequence

GGGAACCCG*UGGGGUGCCC*GGGAGCCC

Length

27 nucleotides

Bulged bases

4DV3|1|A|C|1038

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV3|1|A|G|1002
4DV3|1|A|G|1003
4DV3|1|A|G|1003|||A
4DV3|1|A|A|1004
4DV3|1|A|A|1005
4DV3|1|A|C|1006
4DV3|1|A|C|1007
4DV3|1|A|C|1008
4DV3|1|A|G|1009
*
4DV3|1|A|U|1020
4DV3|1|A|G|1021
4DV3|1|A|G|1022
4DV3|1|A|G|1023
4DV3|1|A|G|1024
4DV3|1|A|U|1025
4DV3|1|A|G|1026
4DV3|1|A|C|1027
4DV3|1|A|C|1028
4DV3|1|A|C|1029
*
4DV3|1|A|G|1032
4DV3|1|A|G|1033
4DV3|1|A|G|1034
4DV3|1|A|A|1035
4DV3|1|A|G|1036
4DV3|1|A|C|1037
4DV3|1|A|C|1038
4DV3|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains