J3_4DV5_006

3D structure

PDB id

4DV5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

AGGGAAC*GGGUGCCCC*GGGGAGCCCU

Length

26 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV5|1|A|A|1001
4DV5|1|A|G|1002
4DV5|1|A|G|1003
4DV5|1|A|G|1003|||A
4DV5|1|A|A|1004
4DV5|1|A|A|1005
4DV5|1|A|C|1006
*
4DV5|1|A|G|1022
4DV5|1|A|G|1023
4DV5|1|A|G|1024
4DV5|1|A|U|1025
4DV5|1|A|G|1026
4DV5|1|A|C|1027
4DV5|1|A|C|1028
4DV5|1|A|C|1029
4DV5|1|A|C|1030
*
4DV5|1|A|G|1031
4DV5|1|A|G|1032
4DV5|1|A|G|1033
4DV5|1|A|G|1034
4DV5|1|A|A|1035
4DV5|1|A|G|1036
4DV5|1|A|C|1037
4DV5|1|A|C|1038
4DV5|1|A|C|1039
4DV5|1|A|U|1040

Current chains

Chain A

16S rRNA

Nearby chains