J3_4DV5_018

3D structure

PDB id

4DV5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A914G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

CUUGACAUGCU*AGCACAG*CUUACG

Length

24 nucleotides

Bulged bases

4DV5|1|A|U|1212, 4DV5|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV5|1|A|C|990
4DV5|1|A|U|991
4DV5|1|A|U|992
4DV5|1|A|G|993
4DV5|1|A|A|994
4DV5|1|A|C|995
4DV5|1|A|A|996
4DV5|1|A|U|997
4DV5|1|A|G|998
4DV5|1|A|C|999
4DV5|1|A|U|1000
*
4DV5|1|A|A|1041
4DV5|1|A|G|1042
4DV5|1|A|C|1043
4DV5|1|A|A|1044
4DV5|1|A|C|1045
4DV5|1|A|A|1046
4DV5|1|A|G|1047
*
4DV5|1|A|C|1210
4DV5|1|A|U|1211
4DV5|1|A|U|1212
4DV5|1|A|A|1213
4DV5|1|A|C|1214
4DV5|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14