J3_4DV7_016

3D structure

PDB id

4DV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

CUUGACAUGCU*AGCACAG*CUUACG

Length

24 nucleotides

Bulged bases

4DV7|1|A|A|996, 4DV7|1|A|U|1212, 4DV7|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV7|1|A|C|990
4DV7|1|A|U|991
4DV7|1|A|U|992
4DV7|1|A|G|993
4DV7|1|A|A|994
4DV7|1|A|C|995
4DV7|1|A|A|996
4DV7|1|A|U|997
4DV7|1|A|G|998
4DV7|1|A|C|999
4DV7|1|A|U|1000
*
4DV7|1|A|A|1041
4DV7|1|A|G|1042
4DV7|1|A|C|1043
4DV7|1|A|A|1044
4DV7|1|A|C|1045
4DV7|1|A|A|1046
4DV7|1|A|G|1047
*
4DV7|1|A|C|1210
4DV7|1|A|U|1211
4DV7|1|A|U|1212
4DV7|1|A|A|1213
4DV7|1|A|C|1214
4DV7|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14