J3_4DV7_020

3D structure

PDB id

4DV7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, A915G, bound with streptomycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

GGGAACCCG*UGGGGUGCCC*GGGAGCCC

Length

27 nucleotides

Bulged bases

4DV7|1|A|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4DV7|1|A|G|1002
4DV7|1|A|G|1003
4DV7|1|A|G|1003|||A
4DV7|1|A|A|1004
4DV7|1|A|A|1005
4DV7|1|A|C|1006
4DV7|1|A|C|1007
4DV7|1|A|C|1008
4DV7|1|A|G|1009
*
4DV7|1|A|U|1020
4DV7|1|A|G|1021
4DV7|1|A|G|1022
4DV7|1|A|G|1023
4DV7|1|A|G|1024
4DV7|1|A|U|1025
4DV7|1|A|G|1026
4DV7|1|A|C|1027
4DV7|1|A|C|1028
4DV7|1|A|C|1029
*
4DV7|1|A|G|1032
4DV7|1|A|G|1033
4DV7|1|A|G|1034
4DV7|1|A|A|1035
4DV7|1|A|G|1036
4DV7|1|A|C|1037
4DV7|1|A|C|1038
4DV7|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14