J3_4GCW_002

3D structure

PDB id

4GCW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RNase Z in complex with precursor tRNA(Thr)

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUAGC*GCAGUCA*UU

Length

14 nucleotides

Bulged bases

4GCW|1|B|A|9||||2_556, 4GCW|1|B|G|46||||2_556, 4GCW|1|B|U|47||||2_556

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4GCW|1|B|A|7||||2_556
4GCW|1|B|U|8||||2_556
4GCW|1|B|A|9||||2_556
4GCW|1|B|G|10||||2_556
4GCW|1|B|C|11||||2_556
*
4GCW|1|B|G|24||||2_556
4GCW|1|B|C|25||||2_556
4GCW|1|B|A|26||||2_556
4GCW|1|B|G|46||||2_556
4GCW|1|B|U|47||||2_556
4GCW|1|B|C|48||||2_556
4GCW|1|B|A|49||||2_556
*
4GCW|1|B|U|65||||2_556
4GCW|1|B|U|66||||2_556

Current chains

Chain B

TRNA(THR)

Nearby chains

Chain A

Ribonuclease Z