J3_4JI0_019

3D structure

PDB id

4JI0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.49 Å

Loop

Sequence

GCCUUGACAU*ACAG*CUUACGGC

Length

22 nucleotides

Bulged bases

4JI0|1|A|U|1212

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI0|1|A|G|988
4JI0|1|A|C|989
4JI0|1|A|C|990
4JI0|1|A|U|991
4JI0|1|A|U|992
4JI0|1|A|G|993
4JI0|1|A|A|994
4JI0|1|A|C|995
4JI0|1|A|A|996
4JI0|1|A|U|997
*
4JI0|1|A|A|1044
4JI0|1|A|C|1045
4JI0|1|A|A|1046
4JI0|1|A|G|1047
*
4JI0|1|A|C|1210
4JI0|1|A|U|1211
4JI0|1|A|U|1212
4JI0|1|A|A|1213
4JI0|1|A|C|1214
4JI0|1|A|G|1215
4JI0|1|A|G|1216
4JI0|1|A|C|1217

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

ribosomal protein S14

Chain S

ribosomal protein S19