J3_4JI3_015

3D structure

PDB id

4JI3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

CUUGACAUG*CACAG*CUUACG

Length

20 nucleotides

Bulged bases

4JI3|1|A|U|1212, 4JI3|1|A|C|1214

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI3|1|A|C|990
4JI3|1|A|U|991
4JI3|1|A|U|992
4JI3|1|A|G|993
4JI3|1|A|A|994
4JI3|1|A|C|995
4JI3|1|A|A|996
4JI3|1|A|U|997
4JI3|1|A|G|998
*
4JI3|1|A|C|1043
4JI3|1|A|A|1044
4JI3|1|A|C|1045
4JI3|1|A|A|1046
4JI3|1|A|G|1047
*
4JI3|1|A|C|1210
4JI3|1|A|U|1211
4JI3|1|A|U|1212
4JI3|1|A|A|1213
4JI3|1|A|C|1214
4JI3|1|A|G|1215

Current chains

Chain A

16S rRNA

Nearby chains

Chain N

RIBOSOMAL PROTEIN S14