J3_4JI3_016

3D structure

PDB id

4JI3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.35 Å

Loop

Sequence

AGGGAACCCGG*CUGGGGUGCC*GGAGCCCU

Length

29 nucleotides

Bulged bases

4JI3|1|A|G|1022

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI3|1|A|A|1001
4JI3|1|A|G|1002
4JI3|1|A|G|1003
4JI3|1|A|G|1003|||A
4JI3|1|A|A|1004
4JI3|1|A|A|1005
4JI3|1|A|C|1006
4JI3|1|A|C|1007
4JI3|1|A|C|1008
4JI3|1|A|G|1009
4JI3|1|A|G|1010
*
4JI3|1|A|C|1019
4JI3|1|A|U|1020
4JI3|1|A|G|1021
4JI3|1|A|G|1022
4JI3|1|A|G|1023
4JI3|1|A|G|1024
4JI3|1|A|U|1025
4JI3|1|A|G|1026
4JI3|1|A|C|1027
4JI3|1|A|C|1028
*
4JI3|1|A|G|1033
4JI3|1|A|G|1034
4JI3|1|A|A|1035
4JI3|1|A|G|1036
4JI3|1|A|C|1037
4JI3|1|A|C|1038
4JI3|1|A|C|1039
4JI3|1|A|U|1040

Current chains

Chain A

16S rRNA

Nearby chains