J3_4JI5_007

3D structure

PDB id

4JI5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.85 Å

Loop

Sequence

GUG*UGUUG*CGCAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4JI5|1|A|G|1072
4JI5|1|A|U|1073
4JI5|1|A|G|1074
*
4JI5|1|A|U|1083
4JI5|1|A|G|1084
4JI5|1|A|U|1085
4JI5|1|A|U|1086
4JI5|1|A|G|1087
*
4JI5|1|A|C|1098
4JI5|1|A|G|1099
4JI5|1|A|C|1100
4JI5|1|A|A|1101
4JI5|1|A|A|1102
4JI5|1|A|C|1103

Current chains

Chain A

16S rRNA

Nearby chains

Chain B

RIBOSOMAL PROTEIN S2

Chain E

RIBOSOMAL PROTEIN S5