3D structure

PDB id
4KZX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 40S ribosomal subunit in complex with eIF1.
Experimental method
X-RAY DIFFRACTION
Resolution
7.81 Å

Loop

Sequence
UCUUAGU*ACGAGAC*GCAAUA
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4KZX|1|i|U|1336
4KZX|1|i|C|1337
4KZX|1|i|U|1338
4KZX|1|i|U|1339
4KZX|1|i|A|1340
4KZX|1|i|G|1341
4KZX|1|i|U|1342
*
4KZX|1|i|A|1379
4KZX|1|i|C|1380
4KZX|1|i|G|1381
4KZX|1|i|A|1382
4KZX|1|i|G|1383
4KZX|1|i|A|1384
4KZX|1|i|C|1385
*
4KZX|1|i|G|1477
4KZX|1|i|C|1478
4KZX|1|i|A|1479
4KZX|1|i|A|1480
4KZX|1|i|U|1481
4KZX|1|i|A|1482

Current chains

Chain i
18S ribosomal RNA

Nearby chains

Chain C
40S ribosomal protein S2
Chain D
40S ribosomal protein S3
Chain Q
40S ribosomal protein S16
Chain R
40S ribosomal protein S17
Chain U
40S ribosomal protein S20
Chain d
40S ribosomal protein S29

Coloring options:

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