3D structure

PDB id
4KZY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 40S ribosomal subunit in complex with eIF1 and eIF1A.
Experimental method
X-RAY DIFFRACTION
Resolution
7.01 Å

Loop

Sequence
CUGGC*GGACAAG*CCCGAGAUUG
Length
22 nucleotides
Bulged bases
4KZY|1|i|U|1473
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4KZY|1|i|C|1387
4KZY|1|i|U|1388
4KZY|1|i|G|1389
4KZY|1|i|G|1390
4KZY|1|i|C|1391
*
4KZY|1|i|G|1446
4KZY|1|i|G|1447
4KZY|1|i|A|1448
4KZY|1|i|C|1449
4KZY|1|i|A|1450
4KZY|1|i|A|1451
4KZY|1|i|G|1452
*
4KZY|1|i|C|1466
4KZY|1|i|C|1467
4KZY|1|i|C|1468
4KZY|1|i|G|1469
4KZY|1|i|A|1470
4KZY|1|i|G|1471
4KZY|1|i|A|1472
4KZY|1|i|U|1473
4KZY|1|i|U|1474
4KZY|1|i|G|1475

Current chains

Chain i
18S Ribosomal RNA

Nearby chains

Chain D
40S Ribosomal Protein S3
Chain F
40S Ribosomal Protein S5
Chain Q
40S Ribosomal Protein S16
Chain R
40S Ribosomal Protein S17
Chain U
40S Ribosomal Protein S20
Chain d
40S Ribosomal Protein S29
Chain g
40S Ribosomal Protein RACK1

Coloring options:

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