J3_4KZZ_002
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- AUUC*GGACCAGAG*CAUUU
- Length
- 18 nucleotides
- Bulged bases
- 4KZZ|1|i|G|987
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4KZZ_002 not in the Motif Atlas
- Homologous match to J3_4V88_033
- Geometric discrepancy: 0.102
- The information below is about J3_4V88_033
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_38616.1
- Basepair signature
- cWW-F-cWW-F-cWW-F-cWW-F-tWW-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
4KZZ|1|i|A|934
4KZZ|1|i|U|935
4KZZ|1|i|U|936
4KZZ|1|i|C|937
*
4KZZ|1|i|G|981
4KZZ|1|i|G|982
4KZZ|1|i|A|983
4KZZ|1|i|C|984
4KZZ|1|i|C|985
4KZZ|1|i|A|986
4KZZ|1|i|G|987
4KZZ|1|i|A|988
4KZZ|1|i|G|989
*
4KZZ|1|i|C|996
4KZZ|1|i|A|997
4KZZ|1|i|U|998
4KZZ|1|i|U|999
4KZZ|1|i|U|1000
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain B
- 40S Ribosomal Protein S3A
- Chain N
- 40S Ribosomal Protein S13
- Chain O
- 40S Ribosomal Protein S14
- Chain a
- 40S Ribosomal Protein S26
Coloring options: