J3_4KZZ_014
3D structure
- PDB id
- 4KZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 40S ribosomal subunit in complex with mRNA, initiator tRNA and eIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 7.03 Å
Loop
- Sequence
- CAGAUCAAAACCAACC*GCUUUG*CUAG
- Length
- 26 nucleotides
- Bulged bases
- 4KZZ|1|i|U|224, 4KZZ|1|i|C|225, 4KZZ|1|i|C|275, 4KZZ|1|i|U|276, 4KZZ|1|i|U|277
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4KZZ|1|i|C|220
4KZZ|1|i|A|221
4KZZ|1|i|G|222
4KZZ|1|i|A|223
4KZZ|1|i|U|224
4KZZ|1|i|C|225
4KZZ|1|i|A|226
4KZZ|1|i|A|227
4KZZ|1|i|A|228
4KZZ|1|i|A|229
4KZZ|1|i|C|230
4KZZ|1|i|C|231
4KZZ|1|i|A|232
4KZZ|1|i|A|233
4KZZ|1|i|C|234
4KZZ|1|i|C|235
*
4KZZ|1|i|G|274
4KZZ|1|i|C|275
4KZZ|1|i|U|276
4KZZ|1|i|U|277
4KZZ|1|i|U|278
4KZZ|1|i|G|279
*
4KZZ|1|i|C|286
4KZZ|1|i|U|287
4KZZ|1|i|A|288
4KZZ|1|i|G|289
Current chains
- Chain i
- 18S Ribosomal RNA
Nearby chains
- Chain E
- 40S Ribosomal Protein S4X
- Chain G
- 40S Ribosomal Protein S6
- Chain I
- 40S Ribosomal Protein S8
- Chain L
- 40S Ribosomal Protein S11
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