3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
UGGA*UAC*GGAA
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4LEL_033 not in the Motif Atlas
Homologous match to J3_5J7L_005
Geometric discrepancy: 0.1087
The information below is about J3_5J7L_005
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_52655.4
Basepair signature
cWW-tSH-cWW-F-cWW-cWW
Number of instances in this motif group
4

Unit IDs

4LEL|1|XA|U|943
4LEL|1|XA|G|944
4LEL|1|XA|G|945
4LEL|1|XA|A|946
*
4LEL|1|XA|U|1235
4LEL|1|XA|A|1236
4LEL|1|XA|C|1237
*
4LEL|1|XA|G|1337
4LEL|1|XA|G|1338
4LEL|1|XA|A|1339
4LEL|1|XA|A|1340

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XG
30S ribosomal protein S7
Chain XI
30S ribosomal protein S9
Chain XM
30S ribosomal protein S13
Chain XU
30S ribosomal protein S21
Chain XV
Transfer RNA; tRNA

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