3D structure

PDB id
4LEL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.9 Å

Loop

Sequence
CAAG*CGCAAAC*GUG
Length
14 nucleotides
Bulged bases
4LEL|1|YA|A|1609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4LEL_048 not in the Motif Atlas
Homologous match to J3_7RQB_008
Geometric discrepancy: 0.0975
The information below is about J3_7RQB_008
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_16623.1
Basepair signature
cWW-tSH-tWW-tHH-F-tHW-cWW-F-cWW
Number of instances in this motif group
2

Unit IDs

4LEL|1|YA|C|1306
4LEL|1|YA|A|1307
4LEL|1|YA|A|1308
4LEL|1|YA|G|1309
*
4LEL|1|YA|C|1605
4LEL|1|YA|G|1606
4LEL|1|YA|C|1607
4LEL|1|YA|A|1608
4LEL|1|YA|A|1609
4LEL|1|YA|A|1610
4LEL|1|YA|C|1611
*
4LEL|1|YA|G|1620
4LEL|1|YA|U|1621
4LEL|1|YA|G|1622

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y7
50S ribosomal protein L34

Coloring options:


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