J3_4LF4_017

3D structure

PDB id

4LF4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of 30S ribosomal subunit from Thermus thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.34 Å

Loop

Sequence

AGGGAAC*GGUGCC*GGAGCCCU

Length

21 nucleotides

Bulged bases

4LF4|1|A|C|1027

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4LF4|1|A|A|1001
4LF4|1|A|G|1002
4LF4|1|A|G|1003
4LF4|1|A|G|1003|||A
4LF4|1|A|A|1004
4LF4|1|A|A|1005
4LF4|1|A|C|1006
*
4LF4|1|A|G|1023
4LF4|1|A|G|1024
4LF4|1|A|U|1025
4LF4|1|A|G|1026
4LF4|1|A|C|1027
4LF4|1|A|C|1028
*
4LF4|1|A|G|1033
4LF4|1|A|G|1034
4LF4|1|A|A|1035
4LF4|1|A|G|1036
4LF4|1|A|C|1037
4LF4|1|A|C|1038
4LF4|1|A|C|1039
4LF4|1|A|U|1040

Current chains

Chain A

16S rRNA

Nearby chains