J3_4LF6_008
3D structure
- PDB id
- 4LF6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.31 Å
Loop
- Sequence
- CGC*GGAC*GGAG
- Length
- 11 nucleotides
- Bulged bases
- 4LF6|1|A|A|1183
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4LF6_008 not in the Motif Atlas
- Homologous match to J3_5J7L_010
- Geometric discrepancy: 0.1845
- The information below is about J3_5J7L_010
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_82365.4
- Basepair signature
- cWW-F-cWW-cWW-F-F
- Number of instances in this motif group
- 4
Unit IDs
4LF6|1|A|C|1116
4LF6|1|A|G|1117
4LF6|1|A|C|1118
*
4LF6|1|A|G|1155
4LF6|1|A|G|1156
4LF6|1|A|A|1157
4LF6|1|A|C|1158
*
4LF6|1|A|G|1181
4LF6|1|A|G|1182
4LF6|1|A|A|1183
4LF6|1|A|G|1184
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain B
- ribosomal protein S2
- Chain I
- ribosomal protein S9
- Chain J
- ribosomal protein S10
- Chain N
- ribosomal protein S14
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