3D structure

PDB id
4LFZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of Paromomycin
Experimental method
X-RAY DIFFRACTION
Resolution
3.92 Å

Loop

Sequence
UUGG*CCUAAC*GGACAG
Length
16 nucleotides
Bulged bases
4LFZ|1|YA|A|2198
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LFZ|1|YA|U|2091
4LFZ|1|YA|U|2092
4LFZ|1|YA|G|2093
4LFZ|1|YA|G|2094
*
4LFZ|1|YA|C|2195
4LFZ|1|YA|C|2196
4LFZ|1|YA|U|2197
4LFZ|1|YA|A|2198
4LFZ|1|YA|A|2199
4LFZ|1|YA|C|2205
*
4LFZ|1|YA|G|2219
4LFZ|1|YA|G|2224
4LFZ|1|YA|A|2225
4LFZ|1|YA|C|2226
4LFZ|1|YA|A|2227
4LFZ|1|YA|G|2228

Current chains

Chain YA
23S rRNA

Nearby chains

Chain QD
30S ribosomal protein S4
Chain Y1
50S ribosomal protein L28
Chain YD
50S ribosomal protein L2
Chain YI
50S ribosomal protein L9

Coloring options:

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