3D structure

PDB id
4LNT (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
2.94 Å

Loop

Sequence
CCAUAG*CGC*GUCG
Length
13 nucleotides
Bulged bases
4LNT|1|YB|U|14, 4LNT|1|YB|C|108
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4LNT|1|YB|C|11
4LNT|1|YB|C|12
4LNT|1|YB|A|13
4LNT|1|YB|U|14
4LNT|1|YB|A|15
4LNT|1|YB|G|16
*
4LNT|1|YB|C|68
4LNT|1|YB|G|69
4LNT|1|YB|C|70
*
4LNT|1|YB|G|106
4LNT|1|YB|U|107
4LNT|1|YB|C|108
4LNT|1|YB|G|109

Current chains

Chain YB
5S rRNA

Nearby chains

Chain Y0
50S ribosomal protein L27
Chain YA
Large subunit ribosomal RNA; LSU rRNA
Chain YS
50S ribosomal protein L18
Chain YZ
50S ribosomal protein L25

Coloring options:

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