J3_4LNT_068
3D structure
- PDB id
- 4LNT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.94 Å
Loop
- Sequence
- CCCAUAG*CG*UCGG
- Length
- 13 nucleotides
- Bulged bases
- 4LNT|1|RB|U|14, 4LNT|1|RB|C|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4LNT_068 not in the Motif Atlas
- Homologous match to J3_7A0S_021
- Geometric discrepancy: 0.3128
- The information below is about J3_7A0S_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_47324.1
- Basepair signature
- cWW-F-F-tSS-F-F-cWW
- Number of instances in this motif group
- 1
Unit IDs
4LNT|1|RB|C|10
4LNT|1|RB|C|11
4LNT|1|RB|C|12
4LNT|1|RB|A|13
4LNT|1|RB|U|14
4LNT|1|RB|A|15
4LNT|1|RB|G|16
*
4LNT|1|RB|C|68
4LNT|1|RB|G|69
*
4LNT|1|RB|U|107
4LNT|1|RB|C|108
4LNT|1|RB|G|109
4LNT|1|RB|G|110
Current chains
- Chain RB
- 5S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain RA
- Large subunit ribosomal RNA; LSU rRNA
- Chain RS
- 50S ribosomal protein L18
- Chain RZ
- 50S ribosomal protein L25
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