J3_4LT8_033

3D structure

PDB id

4LT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.14 Å

Loop

Sequence

CAAG*CUAGUAA*UGAAUACG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

J3_4LT8_033 not in the Motif Atlas

Homologous match to J3_4LFB_002

Geometric discrepancy: 0.1166

The information below is about J3_4LFB_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

J3_85722.1

Basepair signature

cWW-F-F-cSS-F-cWW-tHH-tWW-F-tWH-tHS-cSH-cWW

Number of instances in this motif group

5

Unit IDs

4LT8|1|XA|C|936
4LT8|1|XA|A|937
4LT8|1|XA|A|938
4LT8|1|XA|G|939
*
4LT8|1|XA|C|1344
4LT8|1|XA|U|1345
4LT8|1|XA|A|1346
4LT8|1|XA|G|1347
4LT8|1|XA|U|1348
4LT8|1|XA|A|1349
4LT8|1|XA|A|1350
*
4LT8|1|XA|U|1372
4LT8|1|XA|G|1373
4LT8|1|XA|A|1374
4LT8|1|XA|A|1375
4LT8|1|XA|U|1376
4LT8|1|XA|A|1377
4LT8|1|XA|C|1378
4LT8|1|XA|G|1379

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XG

30S ribosomal protein S7

Chain XI

30S ribosomal protein S9