J3_4OX9_006

3D structure

PDB id

4OX9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the aminoglycoside resistance methyltransferase NpmA bound to the 30S ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

GGGAACCC*GGGGUGC*GAGCCC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4OX9|1|A|G|1002
4OX9|1|A|G|1003
4OX9|1|A|G|1003|||A
4OX9|1|A|A|1004
4OX9|1|A|A|1005
4OX9|1|A|C|1006
4OX9|1|A|C|1007
4OX9|1|A|C|1008
*
4OX9|1|A|G|1021
4OX9|1|A|G|1022
4OX9|1|A|G|1023
4OX9|1|A|G|1024
4OX9|1|A|U|1025
4OX9|1|A|G|1026
4OX9|1|A|C|1027
*
4OX9|1|A|G|1034
4OX9|1|A|A|1035
4OX9|1|A|G|1036
4OX9|1|A|C|1037
4OX9|1|A|C|1038
4OX9|1|A|C|1039

Current chains

Chain A

16S rRNA

Nearby chains