J3_4P6F_037

3D structure

PDB id

4P6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the peptolide 12C bound to bacterial ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GAAC*GGUGCC*GGAGC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4P6F|1|XA|G|1003
4P6F|1|XA|A|1004
4P6F|1|XA|A|1005
4P6F|1|XA|C|1006
*
4P6F|1|XA|G|1023
4P6F|1|XA|G|1024
4P6F|1|XA|U|1025
4P6F|1|XA|G|1026
4P6F|1|XA|C|1027
4P6F|1|XA|C|1028
*
4P6F|1|XA|G|1033
4P6F|1|XA|G|1034
4P6F|1|XA|A|1035
4P6F|1|XA|G|1036
4P6F|1|XA|C|1037

Current chains

Chain XA

16S ribosomal RNA

Nearby chains