3D structure

PDB id
4P70 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the Ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
CC*GUGGAU*AAUCG
Length
13 nucleotides
Bulged bases
4P70|1|RA|G|2833, 4P70|1|RA|A|2835
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
J3_4P70_025 not in the Motif Atlas
Homologous match to J3_7RQB_014
Geometric discrepancy: 0.1091
The information below is about J3_7RQB_014
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
J3_95952.1
Basepair signature
cWW-tHS-F-F-F-cWW-cWW
Number of instances in this motif group
2

Unit IDs

4P70|1|RA|C|2814
4P70|1|RA|C|2815
*
4P70|1|RA|G|2831
4P70|1|RA|U|2832
4P70|1|RA|G|2833
4P70|1|RA|G|2834
4P70|1|RA|A|2835
4P70|1|RA|U|2836
*
4P70|1|RA|A|2882
4P70|1|RA|A|2883
4P70|1|RA|U|2884
4P70|1|RA|C|2885
4P70|1|RA|G|2886

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3
Chain RR
50S ribosomal protein L17
Chain RT
50S ribosomal protein L19

Coloring options:


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