J3_4TUD_043
3D structure
- PDB id
- 4TUD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of ASL-SufJ bound to Codon ACC-C on the Ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- AC*GAUAAGC*GAUGU
- Length
- 14 nucleotides
- Bulged bases
- 4TUD|1|YA|A|74
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4TUD_043 not in the Motif Atlas
- Homologous match to J3_7A0S_002
- Geometric discrepancy: 0.1253
- The information below is about J3_7A0S_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_35667.2
- Basepair signature
- cWW-cWW-F-F-F-cWW-F-cWW
- Number of instances in this motif group
- 7
Unit IDs
4TUD|1|YA|A|56
4TUD|1|YA|C|57
*
4TUD|1|YA|G|70
4TUD|1|YA|A|71
4TUD|1|YA|U|72
4TUD|1|YA|A|73
4TUD|1|YA|A|74
4TUD|1|YA|G|75
4TUD|1|YA|C|76
*
4TUD|1|YA|G|110
4TUD|1|YA|A|111
4TUD|1|YA|U|112
4TUD|1|YA|G|113
4TUD|1|YA|U|114
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y2
- 50S ribosomal protein L29
- Chain Y7
- 50S ribosomal protein L34
- Chain YX
- 50S ribosomal protein L23
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