J3_4U1U_007

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GAAG*UGUGCC*GGAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1U|1|AA|G|1003
4U1U|1|AA|A|1004
4U1U|1|AA|A|1005
4U1U|1|AA|G|1006
*
4U1U|1|AA|U|1023
4U1U|1|AA|G|1024
4U1U|1|AA|U|1025
4U1U|1|AA|G|1026
4U1U|1|AA|C|1027
4U1U|1|AA|C|1028
*
4U1U|1|AA|G|1033
4U1U|1|AA|G|1034
4U1U|1|AA|A|1035
4U1U|1|AA|A|1036
4U1U|1|AA|C|1037

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AN

30S ribosomal protein S14