J3_4U1U_064

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

GGAU*AUUUAAAG*CAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1U|1|BA|G|1055
4U1U|1|BA|G|1056
4U1U|1|BA|A|1057
4U1U|1|BA|U|1058
*
4U1U|1|BA|A|1080
4U1U|1|BA|U|1081
4U1U|1|BA|U|1082
4U1U|1|BA|U|1083
4U1U|1|BA|A|1084
4U1U|1|BA|A|1085
4U1U|1|BA|A|1086
4U1U|1|BA|G|1087
*
4U1U|1|BA|C|1102
4U1U|1|BA|A|1103
4U1U|1|BA|C|1104

Current chains

Chain BA

23S rRNA

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BI

50S ribosomal protein L11