J3_4U1U_069

3D structure

PDB id

4U1U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

UAGAAU*GGAAUACCGGUGG*CGG

Length

22 nucleotides

Bulged bases

4U1U|1|CA|U|723

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1U|1|CA|U|672
4U1U|1|CA|A|673
4U1U|1|CA|G|674
4U1U|1|CA|A|675
4U1U|1|CA|A|676
4U1U|1|CA|U|677
*
4U1U|1|CA|G|713
4U1U|1|CA|G|714
4U1U|1|CA|A|715
4U1U|1|CA|A|716
4U1U|1|CA|U|717
4U1U|1|CA|A|718
4U1U|1|CA|C|719
4U1U|1|CA|C|720
4U1U|1|CA|G|721
4U1U|1|CA|G|722
4U1U|1|CA|U|723
4U1U|1|CA|G|724
4U1U|1|CA|G|725
*
4U1U|1|CA|C|732
4U1U|1|CA|G|733
4U1U|1|CA|G|734

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CF

30S ribosomal protein S6

Chain CK

30S ribosomal protein S11

Chain CO

30S ribosomal protein S15

Chain CR

30S ribosomal protein S18

Chain CU

30S ribosomal protein S21

Chain DC

50S ribosomal protein L2