J3_4U1V_040

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUGAUCUA*UGG*CAAAC

Length

16 nucleotides

Bulged bases

4U1V|1|DA|U|686, 4U1V|1|DA|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1V|1|DA|G|682
4U1V|1|DA|U|683
4U1V|1|DA|G|684
4U1V|1|DA|A|685
4U1V|1|DA|U|686
4U1V|1|DA|C|687
4U1V|1|DA|U|688
4U1V|1|DA|A|689
*
4U1V|1|DA|U|773
4U1V|1|DA|G|774
4U1V|1|DA|G|775
*
4U1V|1|DA|C|791
4U1V|1|DA|A|792
4U1V|1|DA|A|793
4U1V|1|DA|A|794
4U1V|1|DA|C|795

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2

Chain DE

50S ribosomal protein L4