J3_4U1V_042

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGA*UUUAAAGAAA*UCAC

Length

17 nucleotides

Bulged bases

4U1V|1|DA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1V|1|DA|G|1055
4U1V|1|DA|G|1056
4U1V|1|DA|A|1057
*
4U1V|1|DA|U|1081
4U1V|1|DA|U|1082
4U1V|1|DA|U|1083
4U1V|1|DA|A|1084
4U1V|1|DA|A|1085
4U1V|1|DA|A|1086
4U1V|1|DA|G|1087
4U1V|1|DA|A|1088
4U1V|1|DA|A|1089
4U1V|1|DA|A|1090
*
4U1V|1|DA|U|1101
4U1V|1|DA|C|1102
4U1V|1|DA|A|1103
4U1V|1|DA|C|1104

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D4

50S ribosomal protein L36

Chain DI

50S ribosomal protein L11