J3_4U1V_071

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAU*AGACUGCC*GGAGGAAGGUG

Length

22 nucleotides

Bulged bases

4U1V|1|CA|U|1183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1V|1|CA|U|1116
4U1V|1|CA|A|1117
4U1V|1|CA|U|1118
*
4U1V|1|CA|A|1155
4U1V|1|CA|G|1156
4U1V|1|CA|A|1157
4U1V|1|CA|C|1158
4U1V|1|CA|U|1159
4U1V|1|CA|G|1160
4U1V|1|CA|C|1161
4U1V|1|CA|C|1162
*
4U1V|1|CA|G|1174
4U1V|1|CA|G|1175
4U1V|1|CA|A|1176
4U1V|1|CA|G|1177
4U1V|1|CA|G|1178
4U1V|1|CA|A|1179
4U1V|1|CA|A|1180
4U1V|1|CA|G|1181
4U1V|1|CA|G|1182
4U1V|1|CA|U|1183
4U1V|1|CA|G|1184

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CB

30S ribosomal protein S2

Chain CG

30S ribosomal protein S7

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14