J3_4U1V_079

3D structure

PDB id

4U1V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to linopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGGACGG*UCC*GAAAAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U1V|1|DA|G|1424
4U1V|1|DA|G|1425
4U1V|1|DA|G|1426
4U1V|1|DA|A|1427
4U1V|1|DA|C|1428
4U1V|1|DA|G|1429
4U1V|1|DA|G|1430
*
4U1V|1|DA|U|1563
4U1V|1|DA|C|1564
4U1V|1|DA|C|1565
*
4U1V|1|DA|G|1568
4U1V|1|DA|A|1569
4U1V|1|DA|A|1570
4U1V|1|DA|A|1571
4U1V|1|DA|A|1572
4U1V|1|DA|G|1573
4U1V|1|DA|C|1574

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2