J3_4U20_072

3D structure

PDB id

4U20 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to flopristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGA*UUUAAAGAAAG*CUCAC

Length

19 nucleotides

Bulged bases

4U20|1|DA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U20|1|DA|G|1055
4U20|1|DA|G|1056
4U20|1|DA|A|1057
*
4U20|1|DA|U|1081
4U20|1|DA|U|1082
4U20|1|DA|U|1083
4U20|1|DA|A|1084
4U20|1|DA|A|1085
4U20|1|DA|A|1086
4U20|1|DA|G|1087
4U20|1|DA|A|1088
4U20|1|DA|A|1089
4U20|1|DA|A|1090
4U20|1|DA|G|1091
*
4U20|1|DA|C|1100
4U20|1|DA|U|1101
4U20|1|DA|C|1102
4U20|1|DA|A|1103
4U20|1|DA|C|1104

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D4

50S ribosomal protein L36

Chain DG

50S ribosomal protein L6

Chain DI

50S ribosomal protein L11