J3_4U24_022
3D structure
- PDB id
- 4U24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to dalfopristin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUAAU*AGGUUAG*CAUAAG
- Length
- 18 nucleotides
- Bulged bases
- 4U24|1|BA|U|2334
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_4U24_022 not in the Motif Atlas
- Homologous match to J3_5J7L_071
- Geometric discrepancy: 0.052
- The information below is about J3_5J7L_071
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_44961.1
- Basepair signature
- cWW-tSH-F-cWW-F-tHW-cWW-tWW-cWW-F
- Number of instances in this motif group
- 1
Unit IDs
4U24|1|BA|C|2295
4U24|1|BA|U|2296
4U24|1|BA|A|2297
4U24|1|BA|A|2298
4U24|1|BA|U|2299
*
4U24|1|BA|A|2317
4U24|1|BA|G|2318
4U24|1|BA|G|2319
4U24|1|BA|U|2320
4U24|1|BA|U|2321
4U24|1|BA|A|2322
4U24|1|BA|G|2323
*
4U24|1|BA|C|2332
4U24|1|BA|A|2333
4U24|1|BA|U|2334
4U24|1|BA|A|2335
4U24|1|BA|A|2336
4U24|1|BA|G|2337
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BF
- 50S ribosomal protein L5
- Chain BO
- 50S ribosomal protein L18
- Chain BW
- 50S ribosomal protein L27
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