J3_4U26_039

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUGAUCUA*UGG*CAAAC

Length

16 nucleotides

Bulged bases

4U26|1|DA|U|686, 4U26|1|DA|A|792

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U26|1|DA|G|682
4U26|1|DA|U|683
4U26|1|DA|G|684
4U26|1|DA|A|685
4U26|1|DA|U|686
4U26|1|DA|C|687
4U26|1|DA|U|688
4U26|1|DA|A|689
*
4U26|1|DA|U|773
4U26|1|DA|G|774
4U26|1|DA|G|775
*
4U26|1|DA|C|791
4U26|1|DA|A|792
4U26|1|DA|A|793
4U26|1|DA|A|794
4U26|1|DA|C|795

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D2

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2

Chain DE

50S ribosomal protein L4