J3_4U26_045

3D structure

PDB id

4U26 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAU*AGGUUAG*CAUAAG

Length

18 nucleotides

Bulged bases

4U26|1|DA|U|2334, 4U26|1|DA|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4U26|1|DA|C|2295
4U26|1|DA|U|2296
4U26|1|DA|A|2297
4U26|1|DA|A|2298
4U26|1|DA|U|2299
*
4U26|1|DA|A|2317
4U26|1|DA|G|2318
4U26|1|DA|G|2319
4U26|1|DA|U|2320
4U26|1|DA|U|2321
4U26|1|DA|A|2322
4U26|1|DA|G|2323
*
4U26|1|DA|C|2332
4U26|1|DA|A|2333
4U26|1|DA|U|2334
4U26|1|DA|A|2335
4U26|1|DA|A|2336
4U26|1|DA|G|2337

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DF

50S ribosomal protein L5

Chain DO

50S ribosomal protein L18

Chain DW

50S ribosomal protein L27